The detailed information of tRNA gene sequence


Sequence ID>W1610046913
Genome IDBBCW01000052
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [BBCW]
Start position on genome 29071
End posion on genome 29142
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtgaatatat
tRNA gene sequence 
GCTGAGATGGCGGAATGGCTACGCGGTGGACTGCAAATCCATTACATCCCGGTTCGATTC
CGGGTCTCAGCTtag
Downstream region at tRNA end position 
aggtaatttg
Secondary structure (Cloverleaf model)
>W1610046913	Cys	GCA
                   t      Ttag aggtaatttg
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T T
                    T     G G G C C     A
        A A        G      | | | | |     G
      T     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        G     TACAT
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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