The detailed information of tRNA gene sequence


Sequence ID>W1610046916
Genome IDBBCW01000072
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [BBCW]
Start position on genome 19007
End posion on genome 18933
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttcaatccgt
tRNA gene sequence 
GGGCTCGTGGTCTAGACGGTTATGACGTCGCCTTCACACGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGGGCCCACtt
Downstream region at tRNA end position 
ttctttatca
Secondary structure (Cloverleaf model)
>W1610046916	Val	CAC
                   t      ACtt ttctttatca
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      A G A        G      | | | | |     G
    C       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK