The detailed information of tRNA gene sequence


Sequence ID>W1610047358
Genome IDBBDF01000048
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus JCM 9785 [BBDF]
Start position on genome 408
End posion on genome 316
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctccaatac
tRNA gene sequence 
GGAGAGGTGGGTGAGCGGTCGAAACCAGCGGTTTGCTAAACCGCCGTACCGCCAAAAGCG
GTACCGAGGGTTCGAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
cccgctgaaa
Secondary structure (Cloverleaf model)
>W1610047358	Ser	GCT
                   c      GCAA cccgctgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    T       A A C C
      C G A        A     CGTACCGCCAAAAGCGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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