The detailed information of tRNA gene sequence


Sequence ID>W1610047366
Genome IDBBDF01000125
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus JCM 9785 [BBDF]
Start position on genome 4926
End posion on genome 4850
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgaaaaaaac
tRNA gene sequence 
GGGCCCTTAGCTCAGCGGTTTAGAGCGCTCGCCTCACACGCGAGAGGTCAGTGGTTCGAA
TCCACTAGGGCCCACCT
Downstream region at tRNA end position 
gcccgccacc
Secondary structure (Cloverleaf model)
>W1610047366	Val	CAC
                   c      ACCT gcccgccacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C A C C     A
      C G A        A      | | | | |     G
    G       C T C G       A G T G G     C
    G       | | | |                 T T
    T       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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