The detailed information of tRNA gene sequence


Sequence ID>W1610047370
Genome IDBBDF01000171
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus JCM 9785 [BBDF]
Start position on genome 3213
End posion on genome 3139
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccttgcctgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCCGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGCCGGTTCAAA
TCCGGCCGCCCCGACtc
Downstream region at tRNA end position 
aaaaaaggcc
Secondary structure (Cloverleaf model)
>W1610047370	Pro	CGG
                   t      ACtc aaaaaaggcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C C G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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