The detailed information of tRNA gene sequence


Sequence ID>W1610047471
Genome IDBBDI01000014
Search identical group
Phylum/ClassBacillota
SpeciesPaenibacillus pinihumi DSM 23905 = JCM 16419 [BBDI]
Start position on genome 154
End posion on genome 244
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agccatacat
tRNA gene sequence 
GGAGAGATACCCAAGTGGCTCAAGGGGACCCTCTGCTAAGGGGTTAGACTGCGCAAGTGG
TGCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgcgacttac
Secondary structure (Cloverleaf model)
>W1610047471	Ser	GCT
                   t      GCCA tgcgacttac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T C A        G     TAGACTGCGCAAGTGGTGC
                    A - T
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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