The detailed information of tRNA gene sequence


Sequence ID>W1610047607
Genome IDBBDK01000048
Search identical group
Phylum/ClassUnclassified
SpeciesAcidiplasma cupricumulans JCM 13668 [BBDK]
Start position on genome 4458
End posion on genome 4376
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccatcatgat
tRNA gene sequence 
GCGGGGATGGCCCAGAGGTACGGCGGCAGCCTGCTAAGCTGTTTCTCAACAGAGAGCATG
GGTTCGAATCCCATTCCCCGCGCtt
Downstream region at tRNA end position 
tttagtcgtg
Secondary structure (Cloverleaf model)
>W1610047607	Ser	GCT
                   t      GCtt tttagtcgtg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
        G A        G      | | | | |     G
      A     C C C G       A T G G G     C
      G       | | |                 T T
      G     C G G C
        T A        G     TTCTCAACAGAGAGC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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