The detailed information of tRNA gene sequence


Sequence ID>W1610047661
Genome IDBBDM01000006
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 14467 [BBDM]
Start position on genome 109582
End posion on genome 109659
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgagacaaca
tRNA gene sequence 
GCCCCGGTCGTTCAGCCCGGTCAAGGATGTGGGCCTTTCGAGCCCGTGACCCGGGTTCAA
ATCCCGGCCGGGGCACCA
Downstream region at tRNA end position 
tatttttgca
Secondary structure (Cloverleaf model)
>W1610047661	Glu	TTC
                   a      ACCA tatttttgca
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  C         C T T G       C C G G G     C
  G         | + | +                 T T
  G         G G A T
    T C A A        G     TGAC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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