The detailed information of tRNA gene sequence


Sequence ID>W1610047666
Genome IDBBDM01000009
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 14467 [BBDM]
Start position on genome 65200
End posion on genome 65112
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaagaaaac
tRNA gene sequence 
GCCGGGGTGGCCGAGCTAGGTCCAAGGCGCGGGCCTGCTAAGTCCGTCCCCGCAAGGGGG
CCCGGGTTCAAATCCCGGCCCCGGCACCA
Downstream region at tRNA end position 
aggatttctc
Secondary structure (Cloverleaf model)
>W1610047666	Ser	GCT
                   c      ACCA aggatttctc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     A
  A         G C C G       C C G G G     C
  G           | | |                 T T
  G         A G G C
    T C C A        G     TCCCCGCAAGGGGGC
                    C - G
                    G - C
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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