The detailed information of tRNA gene sequence


Sequence ID>W1610047671
Genome IDBBDM01000011
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 14467 [BBDM]
Start position on genome 23988
End posion on genome 23912
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
taaaaatacc
tRNA gene sequence 
GGCCCCGTAGCTCAGCCAGGAAGAGCGGCGGCCTTCGGAGCCGTAGGTCGTGGGTTCAAA
TCCCACCGGGGCCGCCA
Downstream region at tRNA end position 
aaattactat
Secondary structure (Cloverleaf model)
>W1610047671	Arg	TCG
                   c      GCCA aaattactat
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G T G G G     C
    A       | | | |                 T T
    G       G A G C
      G A A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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