The detailed information of tRNA gene sequence


Sequence ID>W1610047675
Genome IDBBDM01000018
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 14467 [BBDM]
Start position on genome 38042
End posion on genome 37947
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taatgaccac
tRNA gene sequence 
AGCGGGGTAGGGTAGCCTGGTAGCCTGCGGGGCTCATAACCCCGAGAACCCAGTCGGGTC
GGGAAGTCCCCGGTTCAAATCCGGGCCCCGCTACCA
Downstream region at tRNA end position 
atatatcttt
Secondary structure (Cloverleaf model)
>W1610047675	Met	CAT
                   c      ACCA atatatcttt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    C       T G G G       C C C G G     C
    T       + | | +                 T T
    G       G C C T
      G T A        G     AGAACCCAGTCGGGTCGGGAAGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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