The detailed information of tRNA gene sequence


Sequence ID>W1610047684
Genome IDBBDN01000004
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 16159 [BBDN]
Start position on genome 76961
End posion on genome 77038
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
caccatactt
tRNA gene sequence 
GGCCCCGTAGCTCAGCATGGATAGAGCGGCGGCCTTCTAAGCCGTAGGTCGTGGGTTCAA
ATCCCACCGGGGCCGCTA
Downstream region at tRNA end position 
gtttttgctt
Secondary structure (Cloverleaf model)
>W1610047684	Arg	TCT
                   t      GCTA gtttttgctt
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    A C G A        A      | | | | |     A
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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