The detailed information of tRNA gene sequence


Sequence ID>W1610047697
Genome IDBBDO01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 16161 [BBDO]
Start position on genome 103273
End posion on genome 103349
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gcttttcctt
tRNA gene sequence 
GGGCCGGTAGTCTAGCCTGGAAGGATGCCCGCCTTGCACGCGGGAGATCCCGGGTTCAAA
TCCCGGCCGGTCCACCA
Downstream region at tRNA end position 
cgccatcaca
Secondary structure (Cloverleaf model)
>W1610047697	Ala	TGC
                   t      ACCA cgccatcaca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G A A        G     AGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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