The detailed information of tRNA gene sequence


Sequence ID>W1610047701
Genome IDBBDO01000002
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 16161 [BBDO]
Start position on genome 223699
End posion on genome 223607
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgattaacga
tRNA gene sequence 
GCCCCGGTAGTATAGCCCGGTCAAGTATGTGGGCCTTTCGAGCCTAGGCAAGGAAAGCCC
GTGACCCGGGTTCAAATCCCGGCCGGGGCACCA
Downstream region at tRNA end position 
tacgttcaat
Secondary structure (Cloverleaf model)
>W1610047701	Glu	TTC
                   a      ACCA tacgttcaat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C A A        G     GGCAAGGAAAGCCCGTGAC
                    T - A
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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