The detailed information of tRNA gene sequence


Sequence ID>W1610047706
Genome IDBBDO01000004
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 16161 [BBDO]
Start position on genome 188849
End posion on genome 188942
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aatgcacctc
tRNA gene sequence 
GGGCCCGTAGTCTAGCCTGGTTAGGATGTCCGCCTTACGAGCGGGAGTCGCGTAAGCGCC
GAGGTCCCGGGTTCAAATCCCGGCGGGCCCACCA
Downstream region at tRNA end position 
cgcggattgt
Secondary structure (Cloverleaf model)
>W1610047706	Val	TAC
                   c      ACCA cgcggattgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T T A          G     AGTCGCGTAAGCGCCGAGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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