The detailed information of tRNA gene sequence


Sequence ID>W1610047710
Genome IDBBDO01000005
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 16161 [BBDO]
Start position on genome 12658
End posion on genome 12566
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaggaatcaa
tRNA gene sequence 
CGGCCCGTAGTCTAGCGGTTAGGATGCCCGCCTCACGCGCGGGAGTCGCGTAAGCGCCCG
AAATCCCGGGTTCGAATCCCGGCGGGCCCACCA
Downstream region at tRNA end position 
cgtttttcgt
Secondary structure (Cloverleaf model)
>W1610047710	Val	CAC
                   a      ACCA cgtttttcgt
                     C   C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    G       T C T G       C C G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          G     AGTCGCGTAAGCGCCCGAAATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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