The detailed information of tRNA gene sequence


Sequence ID>W1610047711
Genome IDBBDO01000006
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 16161 [BBDO]
Start position on genome 201736
End posion on genome 201827
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
cattgttatt
tRNA gene sequence 
AGCCGGGTCGTCTAGCGGCCAAGGATGGCGGGCTTTGGACCAACAGGGGTAGAAACCCGT
TGACCCCGGTTCGAATCCGGGCCCGGCTACCA
Downstream region at tRNA end position 
gcggagtatt
Secondary structure (Cloverleaf model)
>W1610047711	Gln	TTG
                   t      ACCA gcggagtatt
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        C      | | | | |     G
    G       T C T G       C C C G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        G     AGGGGTAGAAACCCGTTGAC
                    G - C
                    C   A
                    G   A
                    G - C
                    G - C
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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