The detailed information of tRNA gene sequence


Sequence ID>W1610047713
Genome IDBBDO01000006
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCM 16161 [BBDO]
Start position on genome 178338
End posion on genome 178260
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atacctaact
tRNA gene sequence 
GGGCCCGTAGCTCAGCAAGGCCCAGAGCGGCGGGCTCCAGACCCGTAGGTCGTGGGTTCA
AATCCCACCGGGCCCACCA
Downstream region at tRNA end position 
attttgcatt
Secondary structure (Cloverleaf model)
>W1610047713	Trp	CCA
                   t      ACCA attttgcatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    A C G A        A      | | | | |     A
  A         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    C C C A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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