The detailed information of tRNA gene sequence


Sequence ID>W121031028
Genome IDAHGJ01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 str. 2011EL-1137 [AHGJ]
Start position on genome 393051
End posion on genome 393125
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tcatcattgc
tRNA gene sequence 
AGGTCTATCGCCAAGCGGTAAGGCAACGGGTTTTGATCCCGTCATCCCATGGTTCGAATC
CATGTAGACCTGCCA
Downstream region at tRNA end position 
ttatctcgat
Secondary structure (Cloverleaf model)
>W121031028	Gln	TTG
                   c      GCCA ttatctcgat
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     A - T          T A
                    T     G T A C C     A
        G A        C      | | | | |     G
      C     A C C G       C A T G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATCC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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