The detailed information of tRNA gene sequence


Sequence ID>W121020065
Genome IDAGUM01000005
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae HC-23A1 [AGUM]
Start position on genome 6167
End posion on genome 6241
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
agaagtttat
tRNA gene sequence 
GGGTCGTTAGCTCAGTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCATAGGTTCAAATC
CTATACGACCCACCA
Downstream region at tRNA end position 
tttccttcat
Secondary structure (Cloverleaf model)
>W121020065	Lys	TTT
                   t      ACCA tttccttcat
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     T A T C C     A
        G A        A      | | | | |     A
      T     C T C G       A T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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