The detailed information of tRNA gene sequence


Sequence ID>W1610067839
Genome IDBCQV01000010
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus shizuokensis NBRC 103103 [BCQV]
Start position on genome 66366
End posion on genome 66277
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttctactc
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGTCCGCAAGGGCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
agaattctag
Secondary structure (Cloverleaf model)
>W1610067839	Ser	TGA
                   c      GCCA agaattctag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        A     CGTGTCCGCAAGGGCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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