The detailed information of tRNA gene sequence


Sequence ID>W1610068741
Genome IDBCRO01000039
Search identical group
Phylum/ClassActinomycetota
SpeciesActinomadura hibisca NBRC 15177 [BCRO]
Start position on genome 31207
End posion on genome 31112
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgtcggtgcc
tRNA gene sequence 
GGAGGCGAGCAGGCGCCTGGTGGCCCTCACGGTCTTCAAAACCGATGGTCCCGAGCATCT
CGGGACGGCGGGTTCGATTCCCGTTCGCCTCCGCCA
Downstream region at tRNA end position 
tccgccgtca
Secondary structure (Cloverleaf model)
>W1610068741	SeC(p)	TCA
                   c      GCCA tccgccgtca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T          T T
                    G     T G C C C     A
      C C G        C      + | | | |     G
    T       C G G A       G C G G G     C
    G         | | |                 T T
    G       C C C T
      T G G        C     TGGTCCCGAGCATCTCGGGACG
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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