The detailed information of tRNA gene sequence


Sequence ID>W121078852
Genome IDAKDQ01000088
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas phaseoli pv. manihotis str. IBSBF 2816 [AKDQ]
Start position on genome 39319
End posion on genome 39227
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcaaaaact
tRNA gene sequence 
GGAGCGATGCCCGAGCGGCTGAAGGGGCTCCCCTGCTAAGGGAGTATAGGGTCAAAAGCT
CTATCGAGGGTTCGAATCCCTCTCGCTCCGCCA
Downstream region at tRNA end position 
gtgttctaga
Secondary structure (Cloverleaf model)
>W121078852	Ser	GCT
                   t      GCCA gtgttctaga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TATAGGGTCAAAAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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