The detailed information of tRNA gene sequence


Sequence ID>W121005252
Genome IDAFSJ01000051
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P2-Fiji [AFSJ]
Start position on genome 11884
End posion on genome 11811
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaaagacaa
tRNA gene sequence 
CGCGGGATAGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGTGGTTCAAA
TCCGCCTCCCGCTAttt
Downstream region at tRNA end position 
taataattaa
Secondary structure (Cloverleaf model)
>W121005252	Met	CAT
                   a      Attt taataattaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C G C C     A
      T G A        A      | | + | |     A
    T       C G A G       G G T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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