The detailed information of tRNA gene sequence


Sequence ID>W121031528
Genome IDAHGR01000011
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter actinomycetemcomitans RhAA1 [AHGR]
Start position on genome 61629
End posion on genome 61705
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tccgaataac
tRNA gene sequence 
GGGTCGTTAGCTTAGTCTGGTAGAGCAGTGGACTCTTAATCCATTGGTCATAGGTTCGAA
TCCTATACGACCCACCA
Downstream region at tRNA end position 
actaaaatct
Secondary structure (Cloverleaf model)
>W121031528	Lys	CTT
                   c      ACCA actaaaatct
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     T A T C C     A
      T G A        A      | | | | |     G
    C       T T C G       A T A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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