The detailed information of tRNA gene sequence


Sequence ID>W121023769
Genome IDAHBC01000017
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas sp. GFAJ-1 [AHBC]
Start position on genome 41166
End posion on genome 41079
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcaaaaagt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTAAGTCGAAAGGCTTC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cagaatatag
Secondary structure (Cloverleaf model)
>W121023769	Ser	GGA
                   t      GCCA cagaatatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TAAGTCGAAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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