The detailed information of tRNA gene sequence


Sequence ID>W121023971
Genome IDAHBJ01000278
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSAR86 cluster bacterium SAR86D [AHBJ]
Start position on genome 1066
End posion on genome 991
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttcttttcgc
tRNA gene sequence 
GCCGGTATAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGTAGGTCCCGAGTTCGACT
CTTGGTGCCGGCACCA
Downstream region at tRNA end position 
ctttttctaa
Secondary structure (Cloverleaf model)
>W121023971	Thr	TGT
                   c      ACCA ctttttctaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T C
                    T     G G T T C     A
      T G A        A      | | + | |     G
    T       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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