The detailed information of tRNA gene sequence


Sequence ID>W121038693
Genome IDAHOM01000014
Search identical group
Phylum/ClassSpirochaetota
SpeciesLeptospira licerasiae str. MMD4847 [AHOM]
Start position on genome 72861
End posion on genome 72772
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
accaagaacc
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTTTATGGTACTTGCTTGGAAAGCAAGCGTAGGGTAACACCTA
CCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
gttcttgttt
Secondary structure (Cloverleaf model)
>W121038693	Ser	GGA
                   c      GCCA gttcttgttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      T T A        A     CGTAGGGTAACACCTACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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