The detailed information of tRNA gene sequence


Sequence ID>W121033364
Genome IDAHIZ01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia sibirica subsp. sibirica BJ-90 [AHIZ]
Start position on genome 203103
End posion on genome 203029
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cttctaatgt
tRNA gene sequence 
TCCTCGGTAGCTTAGTGGTAGAGCAAACGGCTGTTAACCGTTCGGTCGCTGGTTCGAGTC
CGGCCCGAGGAGCCA
Downstream region at tRNA end position 
ttcctcaatt
Secondary structure (Cloverleaf model)
>W121033364	Asn	GTT
                   t      GCCA ttcctcaatt
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     C G G C C     A
        G A        A      | | + | |     G
      T     T T C G       G C T G G     C
      G     + | | |                 T T
      G     G A G C
        T A        A     CGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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