The detailed information of tRNA gene sequence


Sequence ID>W1610206498
Genome IDFCOE02000049
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCaballeronia pedi LMG 29323 [FCOE]
Start position on genome 7633
End posion on genome 7544
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgccttgct
tRNA gene sequence 
GGAGGTGTGGCCGAGCGGTTTAAGGCACCGGTCTTGAAAACCGGCGAAGGAGCGATCCTT
CCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
ccccgcctat
Secondary structure (Cloverleaf model)
>W1610206498	Ser	TGA
                   t      GCCA ccccgcctat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAAGGAGCGATCCTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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