The detailed information of tRNA gene sequence


Sequence ID>W122000106
Genome IDAJGU01000002
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. JC4 [AJGU]
Start position on genome 117589
End posion on genome 117513
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atcatttttT
tRNA gene sequence 
GGCCGCTTCGAATATCGGTTTAGTTCGCCGCCCTCTCAAGGCGGAGAGACGGGTTCGACT
CCCGTAGTGGCTAACC
Downstream region at tRNA end position 
ttaagcctat
Secondary structure (Cloverleaf model)
>W122000106	Glu	CTC
                   T      AACC ttaagcctat
                     G + T
                     G - C
                     C - G
                     C - G
                     G + T
                     C - G
                     T - A          T C
                    T     T G C C C     A
      C T A        C      | | | | |     G
    G       T A A G       A C G G G     C
    G       + | | |                 T T
    T       G T T C
      T T A        G     AGAG
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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