The detailed information of tRNA gene sequence


Sequence ID>W123000854
Genome IDAHKS02000028
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesOpitutaceae bacterium TAV1 [AHKS]
Start position on genome 105034
End posion on genome 105109
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaccatttc
tRNA gene sequence 
GGCTCGGTAGCACAACAGCAGTGCGACGGTTTCATACGCCGTGTCCGTGCGGGTGCGAAT
CCCGCCCGAGCCCCCA
Downstream region at tRNA end position 
atttttcgag
Secondary structure (Cloverleaf model)
>W123000854	Met	CAT
                   c      CCCA atttttcgag
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
        A A        A      | | | | |     G
      C     C A C G       G C G G G     C
      A     | | | |                 T G
      G     G T G C
        C A        G     GTCCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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