The detailed information of tRNA gene sequence


Sequence ID>W123002832
Genome IDBAFH01000001
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Jettenia caeni KSU-1 [BAFH]
Start position on genome 22252
End posion on genome 22348
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttcttttcac
tRNA gene sequence 
GGGAGTGCATGTCGGCTGGTGTCGGCGACGGACTTCAAATCCGGTCTGTCCCGCTTTTAG
CGGGATAGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
ttaaaccttt
Secondary structure (Cloverleaf model)
>W123002832	SeC(p)	TCA
                   c      GCCA ttaaaccttt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       G C T G       G T G G G     C
    G       | | + |                 T T
    T       C G G C
      G T          G     TCTGTCCCGCTTTTAGCGGGATAG
                    A   G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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