The detailed information of tRNA gene sequence


Sequence ID>C132000003
Genome IDAP013059
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCaballeronia insecticola RPE64 [AP013058, AP013059, AP013060]
Start position on genome 1121085
End posion on genome 1120990
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttggattcga
tRNA gene sequence 
GGAAGGCATCCGCATCCGGTGGTGCGGCTGGGCTTCAAACCCAGTAGGGGGTGTCAGACA
CCCTCTGGTCGGTTCGACTCCGGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tgggttttac
Secondary structure (Cloverleaf model)
>C132000003	SeC	TCA
                   a      GCCA tgggttttac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G G C C     A
      C C T        C      | + | | |     G
    G       A C G C       G T C G G     C
    G       | | | |                 T T
    T       T G C G
      G G          G     TAGGGGGTGTCAGACACCCTCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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