The detailed information of tRNA gene sequence


Sequence ID>C131003432
Genome IDCP003359
Search identical group
Phylum/ClassBacillota
SpeciesHalobacteroides halobius DSM 5150 [CP003359]
Start position on genome 40141
End posion on genome 40233
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagataatgT
tRNA gene sequence 
GGAGAGGTGTCCGAGTCTGGCTTAAGGAGCTCGCCTGGAAAGCGAGTAAGGGTTTACGCC
CTTCGAGGGTTCGAATCCCTCCCTCTCCGCCC
Downstream region at tRNA end position 
ttgatgcaat
Secondary structure (Cloverleaf model)
>C131003432	Ser	GGA
                   T      GCCC ttgatgcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G C C T       G A G G G     C
  G           | | |                 T T
  G         A G G A
    C T T A        G     TAAGGGTTTACGCCCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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