The detailed information of tRNA gene sequence


Sequence ID>C131004127
Genome IDCP003539
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Endolissoclinum faulkneri L2 [CP003539]
Start position on genome 848851
End posion on genome 848763
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcctttacaa
tRNA gene sequence 
GGACGGATGACCGAGCGGCTGAAGGTAGCGGTTTTGAAAACCGCCAGGGTGCAATTCCCT
CGTGGGTTCGAATCCCACTCCGTCCGCCA
Downstream region at tRNA end position 
tctattttaa
Secondary structure (Cloverleaf model)
>C131004127	Ser	TGA
                   a      GCCA tctattttaa
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      T G A        A     CAGGGTGCAATTCCCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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