The detailed information of tRNA gene sequence


Sequence ID>C131004239
Genome IDCP003549
Search identical group
Phylum/ClassCyanobacteriota
SpeciesRivularia sp. PCC 7116 [CP003549]
Start position on genome 5251100
End posion on genome 5251010
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttacgacctT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCTCCCTGCTAAGGAGTTATGGGGTTTTAACCC
CATCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
caattattag
Secondary structure (Cloverleaf model)
>C131004239	Ser	GCT
                   T      GTtt caattattag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATGGGGTTTTAACCCCATC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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