The detailed information of tRNA gene sequence


Sequence ID>C131004539
Genome IDCP003597
Search identical group
Phylum/ClassCyanobacteriota
SpeciesChroococcidiopsis thermalis PCC 7203 [CP003597]
Start position on genome 2048957
End posion on genome 2048881
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaaaaatcT
tRNA gene sequence 
GGCTCAGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAAGCCCAAGGTCGGCAGTTCAAA
TCTGCCTTGAGCCATCg
Downstream region at tRNA end position 
gaaattcaag
Secondary structure (Cloverleaf model)
>C131004539	Met	CAT
                   T      ATCg gaaattcaag
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G + T          T A
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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