The detailed information of tRNA gene sequence


Sequence ID>C131004958
Genome IDCP003642
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCylindrospermum stagnale PCC 7417 [CP003642]
Start position on genome 2055670
End posion on genome 2055584
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagatttacT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGCCTGACTTGAAATCAGGTGAAGTGAAAGCTTCC
GGGAGTTCGAATCTCCCCTTCTCCGTtg
Downstream region at tRNA end position 
aaagatttta
Secondary structure (Cloverleaf model)
>C131004958	Ser	TGA
                   T      GTtg aaagatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAAGTGAAAGCTTCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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