The detailed information of tRNA gene sequence


Sequence ID>C131007190
Genome IDCP003803
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Kinetoplastibacterium desouzaii TCC079E [CP003803]
Start position on genome 187391
End posion on genome 187482
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagatgttt
tRNA gene sequence 
GGAGGCGTGCCCGAGTGGCTGAAGGGGCTCCCCTGCTAAGGGAGTGTGTGGCTAAAACTG
CACCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
attaagtttt
Secondary structure (Cloverleaf model)
>C131007190	Ser	GCT
                   t      GCCA attaagtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C C       G T G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TGTGTGGCTAAAACTGCACC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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