The detailed information of tRNA gene sequence


Sequence ID>C131007287
Genome IDCP003805
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Kinetoplastibacterium oncopeltii TCC290E [CP003805]
Start position on genome 561802
End posion on genome 561892
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taataattct
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCTAATGCACCTGACTCGAAATCAGGAGTATACTGTTTGTGT
ACCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gttatattaa
Secondary structure (Cloverleaf model)
>C131007287	Ser	CGA
                   t      GCCA gttatattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G A C G       G T G G G     C
    G         | | |                 T T
    C       A T G C
      C T A        A     AGTATACTGTTTGTGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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