The detailed information of tRNA gene sequence


Sequence ID>C131010407
Genome IDCP003945
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalothece sp. PCC 7418 [CP003945]
Start position on genome 3778321
End posion on genome 3778409
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attacagtcT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGATTGCGGCGGTCTCGAAAACCGCTAGGAGTGCAAGCTCC
TCGAGGGTTCGAATCCCTCCCTCTCCGTtg
Downstream region at tRNA end position 
gagagttata
Secondary structure (Cloverleaf model)
>C131010407	Ser	CGA
                   T      GTtg gagagttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    T       T T G C
      T G A        G     TAGGAGTGCAAGCTCCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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