The detailed information of tRNA gene sequence


Sequence ID>C131010424
Genome IDCP003945
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalothece sp. PCC 7418 [CP003945]
Start position on genome 2320687
End posion on genome 2320597
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaagacctT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCGCCCTGCTAAGGCGTTAGGGGGTTCACGCCT
CCTCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
caacagagat
Secondary structure (Cloverleaf model)
>C131010424	Ser	GCT
                   T      GTtt caacagagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TAGGGGGTTCACGCCTCCTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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