The detailed information of tRNA gene sequence


Sequence ID>C131010426
Genome IDCP003945
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalothece sp. PCC 7418 [CP003945]
Start position on genome 1981875
End posion on genome 1981789
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgaaatttT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGGCCGACTTGAAATCGGCTGAGCCGAGAGGCTCC
GGGAGTTCGAATCTCCCCCTCTCCGTta
Downstream region at tRNA end position 
tcagtaaaaa
Secondary structure (Cloverleaf model)
>C131010426	Ser	TGA
                   T      GTta tcagtaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAGCCGAGAGGCTCC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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