The detailed information of tRNA gene sequence


Sequence ID>C131013415
Genome IDCP004347
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobaculum sp. HO [CP004347]
Start position on genome 52216
End posion on genome 52143
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agcttatttA
tRNA gene sequence 
GGCGACGTGGCCGAGAGGCGAGGCGCGGGACTGCAAATCCCTTTTACAGCGGTTCAAATC
CGCTCGTCGCCTTtt
Downstream region at tRNA end position 
aatatatcaa
Secondary structure (Cloverleaf model)
>C131013415	Cys	GCA
                   A      TTtt aatatatcaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        G      | | | | |     A
      A     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C G        G     TTTAC
                    C   T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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