The detailed information of tRNA gene sequence


Sequence ID>C131017922
Genome IDFO203427
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesPseudodesulfovibrio piezophilus C1TLV30 type strain: C1TLV30 [FO203427]
Start position on genome 1397486
End posion on genome 1397579
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acttccaccc
tRNA gene sequence 
GGAAGCGTTTCGGCACCGGTGTGTCGCTTGGTCTTCAAAACCAATGTACGGCAGTGATGT
CGTAGGCAGGTTCGACTCCTGTACGCTTCCGCCA
Downstream region at tRNA end position 
ttgttaacaa
Secondary structure (Cloverleaf model)
>C131017922	SeC	TCA
                   c      GCCA ttgttaacaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T G T C C     A
      C C A        T      + | | | |     G
    G       C G G C       G C A G G     C
    G       | + | |                 T T
    T       G T C G
      G T          C     TGTACGGCAGTGATGTCGTAG
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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