The detailed information of tRNA gene sequence


Sequence ID>C131017951
Genome IDFO203427
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesPseudodesulfovibrio piezophilus C1TLV30 type strain: C1TLV30 [FO203427]
Start position on genome 779435
End posion on genome 779342
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatcgagacc
tRNA gene sequence 
GGAGAAGTGGCCGAGTTGGCTGAAGGCGCACGCCTGCTAAGCGTGTATGGGGCGTTAAAC
TCCATCGAGAGTTCAAATCTCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tattttaagg
Secondary structure (Cloverleaf model)
>C131017951	Ser	GCT
                   c      GCCA tattttaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
    T T G A        G      | | | | |     A
  G         G C C G       G A G A G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TATGGGGCGTTAAACTCCATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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