The detailed information of tRNA gene sequence


Sequence ID>C131019571
Genome IDHE660029
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesWolbachia endosymbiont of Onchocerca ochengi wOo [HE660029]
Start position on genome 283164
End posion on genome 283253
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaaaaaaaT
tRNA gene sequence 
GGACGGATGGCCGAGTGGTTTAAGGCATCAGTCTTGAAAACTGACGTACGCGGCAAGCGT
ACCATGGGTTCGAATCCCATTCCGTCCGTat
Downstream region at tRNA end position 
attcttttag
Secondary structure (Cloverleaf model)
>C131019571	Ser	TGA
                   T      GTat attcttttag
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTACGCGGCAAGCGTACC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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