The detailed information of tRNA gene sequence


Sequence ID>C131019579
Genome IDHE660029
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesWolbachia endosymbiont of Onchocerca ochengi wOo [HE660029]
Start position on genome 824952
End posion on genome 824877
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttaatatta
tRNA gene sequence 
GGCTGAGTAGCTCAGTTGGCAGAGCAGGAGGATCATAACCTCTTGGTTGTGGGTTCAAAT
CCCTCCTCAGCCACTA
Downstream region at tRNA end position 
gttgtgtttt
Secondary structure (Cloverleaf model)
>C131019579	Met	CAT
                   a      ACTA gttgtgtttt
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      |   | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     TGGTT
                    G + T
                    G - C
                    A - T
                    G - C
                    G - C
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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