The detailed information of tRNA gene sequence


Sequence ID>C131019594
Genome IDHE660029
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesWolbachia endosymbiont of Onchocerca ochengi wOo [HE660029]
Start position on genome 90681
End posion on genome 90592
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatagtatgT
tRNA gene sequence 
GGAAAGGTGGCTGAGTGGTTTAAAGCACACGCTTGGAAAGCGTGCACATATAAAGATATG
TCCGGGGGTTCGAATCCCCCCTTTTCCGTat
Downstream region at tRNA end position 
cacatgtagg
Secondary structure (Cloverleaf model)
>C131019594	Ser	GGA
                   T      GTat cacatgtagg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        A     CACATATAAAGATATGTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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